object 'node_depth' not found

[Edgar G. Kozlova]

Hello, I have been trying to use msaplot like this:

library(ggtree)

MyTree <- read.tree("tree.newick") #check

fasta <- read.fasta("mydata.fasta", package="ggtree")

msaplot(p=ggtree(MyTree), fasta="mydata.fasta")

## Then I'm getting this error and I'm not finding information about it.

Error in ladderize(MyTree, right = FALSE) : object 'node_depth' not found

Thanks in advance.
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[Edgar G. Kozlova]

I solved the problem. Error was due versions. bioconductor was 2.4 and R
was 3.4.

It is working fine now.

Thanks

Post by Edgar G. Kozlova
library(ggtree)
MyTree <- read.tree("tree.newick") #check
fasta <- read.fasta("mydata.fasta", package="ggtree")
msaplot(p=ggtree(MyTree), fasta="mydata.fasta")
## Then I'm getting this error and I'm not finding information about it.
Error in ladderize(MyTree, right = FALSE) : object 'node_depth' not found
Thanks in advance.

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